Insertion junction: LMJ.RY0402.167576_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.167576
Chromosome:chromosome 9
Location:3697705
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g390875 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGCCTAGGTTCCCTCTTGGGCCCCCAG
Internal bar code:CTCGCCGGGCCGAGCGCTACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1162
LEAP-Seq percent confirming:99.711
LEAP-Seq n confirming:4485
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGCAAGTCAGGGGTTACT
Suggested primer 2:ATGCCTTCCCAAGTGTTCTG