Insertion junction: LMJ.RY0402.167811_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.167811
Chromosome:chromosome 16
Location:394036
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g693601 ISG-C2,ISG2 (1 of 5) PTHR16631//PTHR16631:SF9 - FAMILY NOT NAMED // GLUCAN 1,3-BETA-GLUCOSIDASE; Hydroxyproline-rich cell wall protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCAAAGGCAGCTGCAGAATTGGTGGCCA
Internal bar code:GAGCAACTCCAAACACACTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:839
LEAP-Seq percent confirming:99.5658
LEAP-Seq n confirming:3669
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAGAGTGTTGGGTGGAA
Suggested primer 2:TTCATTTCCCATGCTCCTTC