Insertion junction: LMJ.RY0402.168060_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.168060
Chromosome:chromosome 6
Location:8219185
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g305650 PAO6,Tic55-like4,TIC55-4 Pheophorbide a oxygenase-related protein; (1 of 8) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGGGTTACATGCATTACGAAGTGAAGT
Internal bar code:AGCTGCAATAATGCTGGAGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:65
LEAP-Seq percent confirming:14.5099
LEAP-Seq n confirming:897
LEAP-Seq n nonconfirming:5285
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGTTGTCAAGGACAGAAT
Suggested primer 2:ATACGCACGGTTTGTTAGGC