Insertion junction: LMJ.RY0402.168230_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.168230
Chromosome:chromosome 9
Location:595340
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g403650 (1 of 9) IPR000719//IPR002290//IPR011009//IPR020635//IPR027916 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // Protein kinase-like domain, Apicomplexa 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTGTGCCTATCTGAACGCTGATGTAATA
Internal bar code:TCAGGTCCGTTGAGCGCTCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:880
LEAP-Seq percent confirming:99.7609
LEAP-Seq n confirming:2086
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCGCTCTACTGCACACAG
Suggested primer 2:GCCGTAAACGTTCGACAAAT