Insertion junction: LMJ.RY0402.168409_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.168409
Chromosome:chromosome 5
Location:1956551
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g241636 (1 of 1) PTHR23042:SF72 - TRANSCRIPTION FACTOR BHLH104-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGTCGCGGTACACATACACCCCGTGTC
Internal bar code:GGCATGTTGAGGGAGTCAATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1080
LEAP-Seq percent confirming:94.0299
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTGCGTCACTCAAGTTGT
Suggested primer 2:TATTCCCCGTCTCTGTTTGC