Insertion junction: LMJ.RY0402.168631_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.168631
Chromosome:chromosome 9
Location:1220290
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g399915 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAGAAGTGCCCCGGACTCAGACGTCCCA
Internal bar code:TTCTGCGGAGTAGTTTTCATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:521
LEAP-Seq percent confirming:99.747
LEAP-Seq n confirming:1577
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCCCATGTGTGTTTGAG
Suggested primer 2:CTTTAAGAGCCAGGCAGTGG