Insertion junction: LMJ.RY0402.168636_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.168636
Chromosome:chromosome 13
Location:2230594
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre13.g578550 (1 of 3) IPR000104//IPR011009 - Antifreeze protein, type I // Protein kinase-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTCTTGTGTTGCAGCTGCTCCAGCACCT
Internal bar code:CGTCGGCATGCGATGTCTTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:137
LEAP-Seq percent confirming:42.1395
LEAP-Seq n confirming:713
LEAP-Seq n nonconfirming:979
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTGCCTGCCTAGATAGC
Suggested primer 2:AATGGTGAGTCTGGTGAGGG