Insertion junction: LMJ.RY0402.168640_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.168640
Chromosome:chromosome 16
Location:5970478
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g676800 (1 of 1) PTHR11017//PTHR11017:SF145//PTHR11017:SF158//PTHR12203//PTHR12203:SF13 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED // SUBFAMILY NOT NAMED // KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED // F10K1.7 PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTTTGGTGGTGTCGCAACGGCGGGCAGG
Internal bar code:CCTCGGTCCTGGCGAAAGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:582
LEAP-Seq percent confirming:83.8888
LEAP-Seq n confirming:3952
LEAP-Seq n nonconfirming:759
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGTACTGCATGTACGGCG
Suggested primer 2:TTCGAGCTGGAGCATAACCT