Insertion junction: LMJ.RY0402.168721_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.168721
Chromosome:chromosome 17
Location:4121122
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g729600 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTTGATCTACCGTACCTACTGCTCCATG
Internal bar code:GCAGGTCTGCTTGATAAGGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:105
LEAP-Seq percent confirming:84.9905
LEAP-Seq n confirming:1342
LEAP-Seq n nonconfirming:237
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCATCACCGTCAACACAGTC
Suggested primer 2:TGGCCAAAGTAGGTGGTAGG