Insertion junction: LMJ.RY0402.168756_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.168756
Chromosome:chromosome 16
Location:560308
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g692500 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCTCTAACCCTCCCCGTCCATACACGCA
Internal bar code:TTCCTGCTTCTATCCTGCATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:475
LEAP-Seq percent confirming:99.6293
LEAP-Seq n confirming:6182
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCCGTTACTACCCGTCAT
Suggested primer 2:ACAAGCTGCGGTCTTGACTT