Insertion junction: LMJ.RY0402.168831_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.168831
Chromosome:chromosome 7
Location:4177806
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g342450 SEE3 Putative splicing endonuclease positive effector; (1 of 3) K10706 - senataxin [EC:3.6.4.-] (SETX, ALS4) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTTGATGGGTACCAGGTGGGGCGGCTGG
Internal bar code:CATATCCTCGGCTGTACAGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:297
LEAP-Seq percent confirming:99.7739
LEAP-Seq n confirming:1765
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCGAGATGCTGCCTACAT
Suggested primer 2:TGACATCTCCTTCCACCTCC