Insertion junction: LMJ.RY0402.168857_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.168857
Chromosome:chromosome 3
Location:2277128
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g158050 PPP11 (1 of 1) PF00686//PF07228 - Starch binding domain (CBM_20) // Stage II sporulation protein E (SpoIIE) (SpoIIE); Phosphoprotein phosphatase 2C-related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCTCTCCCGCCCGAGCAGGAGACGAAGA
Internal bar code:TGGTTGGGTCCAGCCCGAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:877
LEAP-Seq percent confirming:99.5838
LEAP-Seq n confirming:5503
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAGTAGGCTGCATGACTG
Suggested primer 2:CCGATAACCTACATGCACCC