Insertion junction: LMJ.RY0402.168950_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.168950
Chromosome:chromosome 3
Location:3667618
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g169000 (1 of 26) IPR011990 - Tetratricopeptide-like helical domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGACATGCGGTTTCACCTTTCCCAGTCA
Internal bar code:TAGGTCCGATACAAAAGTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:842
LEAP-Seq percent confirming:99.7275
LEAP-Seq n confirming:1830
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAGGCTGTCCAGCAGAAG
Suggested primer 2:GATCGATGGCTTACCTGGAA