Insertion junction: LMJ.RY0402.169320_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.169320
Chromosome:chromosome 17
Location:2689877
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g717850 PHC8 (1 of 1) IPR003882//IPR024616//IPR027417 - Pistil-specific extensin-like protein // Pherophorin // P-loop containing nucleoside triphosphate hydrolase; Pherophorin-chlamydomonas homolog 8 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGCCCACTGCGCCGCGGGGCCTTTCTTT
Internal bar code:GTCGTAGGTGGAGACGTTAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:803
LEAP-Seq percent confirming:98.5965
LEAP-Seq n confirming:4777
LEAP-Seq n nonconfirming:68
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGACAGCACCGTCTGTTG
Suggested primer 2:CTGACGACCCCGTATTGTCT