Insertion junction: LMJ.RY0402.169400_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.169400
Chromosome:chromosome 2
Location:9097695
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre02.g143307 CLPC1 (1 of 1) PTHR11638//PTHR11638:SF96 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED; ClpC chaperone, Hsp100 family 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAATGCGTGCATGTGCCTCCCTTTGGTTG
Internal bar code:CTAGACGGATTAATGATGCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:456
LEAP-Seq percent confirming:99.0957
LEAP-Seq n confirming:1315
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTTGAAGACCACGCATGA
Suggested primer 2:GATGGCAAGGTGATGATGTG