Insertion junction: LMJ.RY0402.169407_5

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.169407
Chromosome:chromosome 16
Location:4634801
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g687600 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCACGCAGACACAGGCACCCCGTTGCA
Internal bar code:AGCGTCCTCCGTAAATGAAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:925
LEAP-Seq percent confirming:99.3088
LEAP-Seq n confirming:4741
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCTTCTTCCACAGCGAGT
Suggested primer 2:ATGTAGGCCTGCCAAATCAC