Insertion junction: LMJ.RY0402.169631_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.169631
Chromosome:chromosome 5
Location:1597103
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre05.g243453 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCCGGAGAGCTAGCGATGACCGCAAAAC
Internal bar code:AGTCGTTATGGCATTCTCTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:577
LEAP-Seq percent confirming:99.8755
LEAP-Seq n confirming:802
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTCGAGCGGCTCATATTT
Suggested primer 2:ACTGGATGGCTTCGAGCTAA