Insertion junction: LMJ.RY0402.169703_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.169703
Chromosome:chromosome 6
Location:3024466
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g273900 HTA41 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCACCTTCAGGGGTGCCTACCTGCTCT
Internal bar code:CCGTCAGAGGGCGTTCGGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:645
LEAP-Seq percent confirming:91.0037
LEAP-Seq n confirming:2974
LEAP-Seq n nonconfirming:294
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CATTGCACGCTACCTGAAGA
Suggested primer 2:ACCCTGACACGTATTGCCTC