Insertion junction: LMJ.RY0402.169756_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.169756
Chromosome:chromosome 11
Location:241100
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g467555 (1 of 1) PF00023//PF13857 - Ankyrin repeat (Ank) // Ankyrin repeats (many copies) (Ank_5) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCCTACATGGGCGTGGACTTGTAGCTA
Internal bar code:GTTAACAAGGTGAAATCATTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:143
LEAP-Seq percent confirming:64.4444
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTATGGATAGGAGGCGT
Suggested primer 2:TTCTGTCACGCCTGTCTGTC