Insertion junction: LMJ.RY0402.170058_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.170058
Chromosome:chromosome 11
Location:2055297
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g468650 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTCGTTGGTCATGTGGGTTGTGCAGACA
Internal bar code:CAAAATTCAGTTCTCCACATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:363
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ATTACGGCAGTCCCACTACG
Suggested primer 2:GGAGTTCTGTCTCGACCAGC