Insertion junction: LMJ.RY0402.170365_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.170365
Chromosome:chromosome_9
Location:6535358
Confidence (%):73
Locus systematic id Locus common name Defline Orientation Feature
Cre09.g407801 AKC1 sense CDS

Insertion site details

Flanking sequence (orientation from cassette outwards):GTGGCGATGTTGCGGTAGCCGCGGGAGTCC
Internal bar code:AGTCCACCGGTCTACACTAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:117
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGGTGATCAAGGTGCTC
Suggested primer 2:CACACACACACACAAACCGA