Insertion junction: LMJ.RY0402.170442_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.170442
Chromosome:chromosome 16
Location:1967655
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g656433 TNP41,CSB59 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon); {"Probable transposon-derived protein of Chlamydomonas-Specific family B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGTAATTGCATACTGCATCGGCAGCTCG
Internal bar code:ACGCGGCGTGCCGAACGGGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:981
LEAP-Seq percent confirming:97.5713
LEAP-Seq n confirming:924
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACCTTGGAGGTCTTGTA
Suggested primer 2:CTCAGACTGTGAAGGGGCTC