Insertion junction: LMJ.RY0402.170686_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.170686
Chromosome:chromosome 2
Location:3854872
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g095900 ROC114,ROC108 Rhythm Of Chloroplast 114; (1 of 13) PF00646 - F-box domain (F-box) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTGCAAGGCACCGCGCGCCACTCCGCAA
Internal bar code:ACCAGGATTCAAGCCCAACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:518
LEAP-Seq percent confirming:62.6667
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CACTAACAACGCCTGAAGCA
Suggested primer 2:CCTCATGTTGACCGTGTTTG