Insertion junction: LMJ.RY0402.171076_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.171076
Chromosome:chromosome 17
Location:2687669
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g717850 PHC8 (1 of 1) IPR003882//IPR024616//IPR027417 - Pistil-specific extensin-like protein // Pherophorin // P-loop containing nucleoside triphosphate hydrolase; Pherophorin-chlamydomonas homolog 8 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGCCCGAGTGAGTGTGGCCTGGGGCCT
Internal bar code:CGGTTCGGATTAGGGAGAGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:600
LEAP-Seq percent confirming:99.5243
LEAP-Seq n confirming:1046
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTCCCCCTCCTCCTTCT
Suggested primer 2:GGACTCGAAGTAACGCAAGC