Insertion junction: LMJ.RY0402.171278_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.171278
Chromosome:chromosome 3
Location:4487310
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g176150 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCTTAATAACTTAGCGCCGTACTGCAC
Internal bar code:CATGGCTCTCTTCGGGTAAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:798
LEAP-Seq percent confirming:99.7065
LEAP-Seq n confirming:9171
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCTATCAGTACGTGCAGCCG
Suggested primer 2:GCGTTCGCTTAAGAGGAGAA