Insertion junction: LMJ.RY0402.171343_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.171343
Chromosome:chromosome 7
Location:5468782
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g350750 PTO1,PTOX1 (1 of 2) K17893 - ubiquinol oxidase (AOX1, AOX2); Plastid terminal oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTTGCTTCCTTCCAGGTCTGGCGCTTCG
Internal bar code:CCTTCGTTGCCCTATGTGAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:798
LEAP-Seq percent confirming:99.5341
LEAP-Seq n confirming:1709
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTAACGCTCGCTGTCCTT
Suggested primer 2:GTCACGGCTGTATTGGGACT