Insertion junction: LMJ.RY0402.171514_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.171514
Chromosome:chromosome 9
Location:1828284
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g395950 AOX1 Alternative oxidase, mitochondrial; (1 of 2) PTHR31803//PTHR31803:SF3 - FAMILY NOT NAMED // ALTERNATIVE OXIDASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTCCATAGCTTCGGTTCCGCCCCAGCAC
Internal bar code:GATGTAAGCTAATCAGGTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:488
LEAP-Seq percent confirming:94.3109
LEAP-Seq n confirming:3100
LEAP-Seq n nonconfirming:187
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCAAAAATGAAGGGTCGT
Suggested primer 2:AACCTGAAGAGAGGCACGAA