Insertion junction: LMJ.RY0402.171549_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.171549
Chromosome:chromosome 3
Location:657203
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g145827 subtilisin-like Type II membrane endoprotease; (1 of 1) IPR000209//IPR003882//IPR015500 - Peptidase S8/S53 domain // Pistil-specific extensin-like protein // Peptidase S8, subtilisin-related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATATGCAAACCGTTGCCCTGCAAATTCG
Internal bar code:TCGTACTAGTCGGATTCGTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:179
LEAP-Seq percent confirming:80.5556
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGTACGCGTAAGTGGCGTAG
Suggested primer 2:ACACCTCCCACATCCTCAAG