Insertion junction: LMJ.RY0402.171584_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.171584
Chromosome:chromosome 2
Location:7443572
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre02.g144350 RJL1 Small Rab-related GTPase; (1 of 1) K19372 - DnaJ homolog subfamily C member 27 (DNAJC27) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCCCCACTACCACCACTTAAACCAAAGC
Internal bar code:AGCGAACGACTTGAGCTATCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:593
LEAP-Seq percent confirming:75.9639
LEAP-Seq n confirming:926
LEAP-Seq n nonconfirming:293
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCTAATCTTATCGGAGGC
Suggested primer 2:TCCACTGCTCTGCATTCAAC