Insertion junction: LMJ.RY0402.171974_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.171974
Chromosome:chromosome 11
Location:1794183
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g467500 (1 of 1) PF05664 - Plant family of unknown function (DUF810) (DUF810) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGTTTTGCTTGCGTACCGTACTTGGTGC
Internal bar code:ATGCAACCTCTCCGCGACGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:509
LEAP-Seq percent confirming:99.5577
LEAP-Seq n confirming:2926
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCACAGCCTGTCTACCAC
Suggested primer 2:ACGGCTTCATATTTTCACGG