Insertion junction: LMJ.RY0402.171995_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.171995
Chromosome:chromosome 3
Location:7918296
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g202300 (1 of 3) IPR000104//IPR001859 - Antifreeze protein, type I // Trypanosoma cruzi ribosomal protein P2-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGGGCAGCTACAGACGGTGCCGGCACCG
Internal bar code:GAGGGTGTCTTGCCGTCGGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:301
LEAP-Seq percent confirming:91.4163
LEAP-Seq n confirming:639
LEAP-Seq n nonconfirming:60
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CTATGCCCTAAGAAGCACCG
Suggested primer 2:CCTCCTCATCCGAGCTACTG