Insertion junction: LMJ.RY0402.172033_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.172033
Chromosome:chromosome 5
Location:3031395
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g238600 PHC36 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 36 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTTGGGGGGAGGGGCATCCGAACCGCAT
Internal bar code:CATGAACGTGTCAAGGTGGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:251
LEAP-Seq percent confirming:93.8326
LEAP-Seq n confirming:213
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTGACGAAGGTCGAGTAGCC
Suggested primer 2:CTCTTAAGCCGTCGCATTTC