Insertion junction: LMJ.RY0402.172039_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.172039
Chromosome:chromosome 4
Location:2960624
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g224826 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCCAAACGGCCATGCGTGTTTGCTGTCT
Internal bar code:CTCAGGTTGTGACTTTACCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:475
LEAP-Seq percent confirming:81.0127
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TACTGCATTCTCTTCGGGCT
Suggested primer 2:CGTGATTACGGATGTGATGC