Insertion junction: LMJ.RY0402.172105_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.172105
Chromosome:chromosome 9
Location:4711569
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g397031 (1 of 6) 5.3.99.5 - Thromboxane-A synthase / Thromboxane synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCTGGGATGTATGTTTGACACAACAGC
Internal bar code:GTCGGGGGTGTGCAGTCATATA

Confirmation - LEAP-Seq

LEAP-Seq distance:116
LEAP-Seq percent confirming:59.874
LEAP-Seq n confirming:285
LEAP-Seq n nonconfirming:191
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTTACCCAGGTGATGTTT
Suggested primer 2:CACCATGCCTTTTCCAAGAT