Insertion junction: LMJ.RY0402.172106_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.172106
Chromosome:chromosome 9
Location:5235206
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g399552 LCR1 Low-CO2 response regulator, Myb-like transcription factor; (1 of 25) IPR001005//IPR009057//IPR017930 - SANT/Myb domain // Homeodomain-like // Myb domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAAATGTACGGCGCCTCTCTACCGGAAA
Internal bar code:TATGGGCAGAGTAGCAAATAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1036
LEAP-Seq percent confirming:99.7165
LEAP-Seq n confirming:1407
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTTGACCTACCGAACCTA
Suggested primer 2:AAATACGCGCCTTAATGTGG