Insertion junction: LMJ.RY0402.172159_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.172159
Chromosome:chromosome 4
Location:4021966
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g232402 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGTGACAGACCGACTCACATTTCAGCCC
Internal bar code:GCGTGAGCAACAGAACGCGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1030
LEAP-Seq percent confirming:98.8201
LEAP-Seq n confirming:7454
LEAP-Seq n nonconfirming:89
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TACCTATCGGTGTGCTGCTG
Suggested primer 2:ATTCAGTGGGTCGTAGTCGG