Insertion junction: LMJ.RY0402.172221_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.172221
Chromosome:chromosome 3
Location:385891
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g144887 (1 of 1) IPR000048//IPR003590//IPR006553 - IQ motif, EF-hand binding site // Leucine-rich repeat, ribonuclease inhibitor subtype // Leucine-rich repeat, cysteine-containing subtype 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGTGATGCGGTGGGCTCATCAGTGCTGC
Internal bar code:CGAACTTGTCCAGCGCATCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:518
LEAP-Seq percent confirming:62.2727
LEAP-Seq n confirming:137
LEAP-Seq n nonconfirming:83
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTGCGTGTTGTACCTCCC
Suggested primer 2:GAGGCTTAAGCATGCTGGTC