Insertion junction: LMJ.RY0402.172262_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.172262
Chromosome:chromosome 13
Location:4101857
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g591501 PUS2 (1 of 2) PTHR11142:SF0 - TRNA PSEUDOURIDINE SYNTHASE-LIKE 1; RNA pseudouridine synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCGCCCCAGGCCTTGCCTACGGTGACTT
Internal bar code:CGTATGGTTGGGCGGAGTAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:484
LEAP-Seq percent confirming:99.7037
LEAP-Seq n confirming:1346
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTACGACGGCACCGACTACT
Suggested primer 2:AAACCAACACCAGAACCAGC