Insertion junction: LMJ.RY0402.172489_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.172489
Chromosome:chromosome 1
Location:2713875
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g016100 (1 of 7) IPR011048 - Cytochrome cd1-nitrite reductase-like, haem d1 domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCCGGCATGGCCGTTGCGCGCGACTCA
Internal bar code:CACACGAAATTCGTCCGGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:395
LEAP-Seq percent confirming:73.0669
LEAP-Seq n confirming:15743
LEAP-Seq n nonconfirming:5803
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGTGATGAAAGCGTGGTC
Suggested primer 2:ACAAATTCACGCACTTGCAG