Insertion junction: LMJ.RY0402.172540_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.172540
Chromosome:chromosome 4
Location:1493822
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre04.g213904 Mitogen-Activated Protein Kinase 3; (1 of 1) K02208 - cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] (CDK8_11) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGTGGTGTTGCCCCGTTGAGTGAACCA
Internal bar code:CCTCGCTTCTCTGGGGCCGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:121
LEAP-Seq percent confirming:52.1429
LEAP-Seq n confirming:146
LEAP-Seq n nonconfirming:134
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGTAAGGTCCCACTCCCAAT
Suggested primer 2:AACATTGCGCAAAGACAGTG