Insertion junction: LMJ.RY0402.172549_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.172549
Chromosome:chromosome 16
Location:7018261
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g677989 (1 of 2) PF06977 - SdiA-regulated (SdiA-regulated) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTTCTAGACCACCTGGATGGCCTTACGG
Internal bar code:TAATCCGTGAGAACGAGGTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:684
LEAP-Seq percent confirming:88.5065
LEAP-Seq n confirming:2572
LEAP-Seq n nonconfirming:334
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCCAAATCATCACACCAT
Suggested primer 2:TACCCACCCCTGACTCTCAC