Insertion junction: LMJ.RY0402.172598_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.172598
Chromosome:chromosome 12
Location:4074394
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g517700 NYC1,SDR21 (1 of 2) K13606 - chlorophyll(ide) b reductase (NOL, NYC1); Chlorophyll b reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTACAACATGCGCGCAGCGAAGGCGTAGG
Internal bar code:TTCGGATATGCTATAGTTGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:665
LEAP-Seq percent confirming:90.3074
LEAP-Seq n confirming:2879
LEAP-Seq n nonconfirming:309
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGGTGAGTACAAAGCAA
Suggested primer 2:GATCGTGGGCTTGTTACGTT