Insertion junction: LMJ.RY0402.172729_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.172729
Chromosome:chromosome 5
Location:913615
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g247300 (1 of 1) PF13432//PF13489 - Tetratricopeptide repeat (TPR_16) // Methyltransferase domain (Methyltransf_23) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCCCTTCATCTGCACCCGTGCCTGTGG
Internal bar code:TTGCGGAGTCCCACTGGCGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1026
LEAP-Seq percent confirming:76.0356
LEAP-Seq n confirming:16759
LEAP-Seq n nonconfirming:5282
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:GCTACGGAAGACTGGAGGTG
Suggested primer 2:TCTCACACTGGCTCTCATGG