Insertion junction: LMJ.RY0402.172779_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.172779
Chromosome:chromosome 17
Location:3401690
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre17.g724100 5'UTR|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGTCGTGGTGAGCCGCTCCGAAAGCCTC
Internal bar code:TATAGTCGGGCCTGCAGCTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1135
LEAP-Seq percent confirming:99.8277
LEAP-Seq n confirming:1159
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCATAATAATGCGTGGGTCC
Suggested primer 2:GAGAGCATTACGGTGTGGGT