Insertion junction: LMJ.RY0402.172785_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.172785
Chromosome:chromosome 1
Location:4722896
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g032550 CGL127 (1 of 1) K11267 - sister chromatid cohesion protein PDS5 (PDS5); Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGTGCGCCGTAGCTGGCCCACAGCGCGG
Internal bar code:GATGTTGGGCATAGTTGCGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:750
LEAP-Seq percent confirming:96.9565
LEAP-Seq n confirming:446
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GTAATAAGGGGAGGGCAAGC
Suggested primer 2:GTGCAGCTCCTGCTAGGTCT