Insertion junction: LMJ.RY0402.172807_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.172807
Chromosome:chromosome 4
Location:1186815
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre04.g215600 (1 of 1) PTHR32183:SF6 - THIOCYANATE METHYLTRANSFERASE 1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAAGGGCGGGCCCTGCAGCCAGACGCAT
Internal bar code:AGGAGAGAACGCCACGCACCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:598
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1274
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCCGAATTCCTTAGATTG
Suggested primer 2:GCGACTTCTTCAAGTTTGCC