Insertion junction: LMJ.RY0402.172824_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.172824
Chromosome:chromosome 9
Location:4663146
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g396735 (1 of 1) PTHR18895:SF3 - METHYLTRANSFERASE-LIKE PROTEIN 20 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACCACGCTGGCCGCGCCGTACTTGAGCG
Internal bar code:CACGGCTGACGCCCCCGATCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:351
LEAP-Seq percent confirming:58.7711
LEAP-Seq n confirming:593
LEAP-Seq n nonconfirming:416
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCTTGACCACGAAGTCCT
Suggested primer 2:CGTGAAATGGCGAGTGTATG