Insertion junction: LMJ.RY0402.172920_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.172920
Chromosome:chromosome 8
Location:3934628
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g378500 (1 of 239) IPR016024 - Armadillo-type fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCTCCGTCTTCAATGCTTGTTCAGTGCA
Internal bar code:GGCTAGAAGCGAGTCTTGGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:154
LEAP-Seq percent confirming:99.8566
LEAP-Seq n confirming:4873
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACGACATTCCGTTGTAAGGC
Suggested primer 2:TGCCTGAGAGTCCTTCCTGT