Insertion junction: LMJ.RY0402.172971_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.172971
Chromosome:chromosome 13
Location:2441847
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g579800 (1 of 1) 2.7.4.26 - Isopentenyl phosphate kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCTGTGAGGCTGTGACGCCATGGGCCA
Internal bar code:TTAAACATTTGGCTATCGCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:383
LEAP-Seq percent confirming:99.3205
LEAP-Seq n confirming:1754
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCATCCTTTTCAAGCTC
Suggested primer 2:ACTAAACCAGATGCGGTTGG