Insertion junction: LMJ.RY0402.173057_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.173057
Chromosome:chromosome 5
Location:2439428
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre05.g235355 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCTCATTTTGGTTTCTTGGCGGTCACAC
Internal bar code:CGCCACCTCGTGTGAAAACTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:383
LEAP-Seq percent confirming:99.3328
LEAP-Seq n confirming:1340
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACACAAACAGCCTACTGCCC
Suggested primer 2:GTGATGTGGTGTGCTTGGAC